topos-unified

Topos Unified Skill

Trit: +1 (PLUS/Generator) | Color: #D82626 | Subagent: Generator

Unified access to all topos-theoretic resources across the filesystem - mathematical music theory, categorical databases, infinity topoi, pretopos trees, and gayzip manifests.

bmorphism Contributions

"universal topos construction for social cognition and democratization of mathematical approach to problem-solving to all" — Plurigrid: the story thus far

Universal Topos for Cognition: This skill embodies bmorphism's vision of a universal topos construction — a single categorical framework that unifies all modalities of knowledge (music, databases, distributed systems, proofs).

Topos Institute Integration: The skill connects to Topos Institute resources including CatColab, StructuredDecompositions.jl, and the algebraicjulia ecosystem.

Active Inference in Topoi: A topos is a universe where logic lives. Active Inference in String Diagrams works internal to any topos — the skill provides the categorical infrastructure for multi-world cognitive agents.

Infinity Topos: The infinity-topos resources enable higher-categorical reasoning where agents can have beliefs about beliefs about beliefs — the full tower of metacognition.

GF(3) Triads

topos-unified (+1) ⊗ world-hopping (0) ⊗ sheaf-cohomology (-1) = 0 ✓  [Navigation]
topos-unified (+1) ⊗ acsets (0) ⊗ persistent-homology (-1) = 0 ✓     [Database]
topos-unified (+1) ⊗ unworld (0) ⊗ three-match (-1) = 0 ✓            [Derivation]

Resource Index

Core Projects

Path	Description
~/ies/music-topos	Main workspace: Mazzola's topos of music + MCP saturation
~/worlds/B/bmorphism/infinity-topos	RISC Zero zkVM distributed witnessing with infinity-topos
~/worlds/B/bmorphism/pretopos	Berkeley Seminar notes and forrest trees
~/worlds/P/plurigrid/topos	Plurigrid topos with pretopos submodule
~/ies/hatchery_repos/TeglonLabs__topoi	topOS and topos-mcp shells

Gayzip Manifests (~/ies/rio/gayzip/*.topos)

File	Purpose
cognitive_superposition.topos	NILFS2 ⊛ JPEG2000 saturated interactome
interactome.topos	Contributor graph closure
jpeg2000.topos	HTJ2K/OpenJPH codec topos
nilfs2.topos	Linux filesystem topos
gayamp_parallel.topos	Parallel amplification manifest
fogus_gay.topos	Fogus-style functional coloring

Pretopos Forest Trees (~/ies/hatchery_repos/bmorphism__pretopos/trees/)

• topos-0001.tree → Berkeley Seminar Notes index
• topos-0002.tree through topos-000J.tree → Seminar sessions
• efr-*.tree → Effective topos constructions
• double-operad.tree → Double operad structures

PDFs (~/ies/)

File	Content
mazzola-topos-of-music.pdf	Topos of Music (full)
mazzola-topos-music-I-theory.pdf	Part I: Theory
mazzola-topos-music-III-gestures.pdf	Part III: Gestures

.topos Directories (World Markers)

~/worlds/.topos              # Root worlds marker
~/worlds/B/.topos            # bmorphism cluster
~/ies/music-topos/.topos     # Local workspace scratch
~/CatColab/packages/catcolab-tui/.topos
~/VERS/vers-sdk-ruby/.topos
~/allenai/.topos

Installed Skills (topos-related)

From ~/.claude/plugins/cache/local-topos-skills/topos-skills/1.0.0/skills/:

• acsets/ - Attributed C-Sets algebraic databases
• glass-bead-game/ - Hesse interdisciplinary synthesis
• world-hopping/ - Badiou possible world navigation
• unworld/ - Color chain derivations
• bisimulation-game/ - Resilient skill dispersal

Quick Access Commands

# List all .topos manifests
bb -e '(require (quote [babashka.fs :as fs])) (run! println (fs/glob (System/getProperty "user.home") "**/*.topos" {:max-depth 5}))'

# Search topos-related files
bb -e '(require (quote [babashka.fs :as fs])) (run! println (fs/glob (System/getProperty "user.home") "**/*topos*" {:max-depth 5}))'

# Read gayzip manifest
cat ~/ies/rio/gayzip/cognitive_superposition.topos

# Browse pretopos trees
ls ~/ies/hatchery_repos/bmorphism__pretopos/trees/

Clojure Integration

(ns topos.unified
  (:require [babashka.fs :as fs]))

(def topos-roots
  {:music-topos    (fs/expand-home "~/ies/music-topos")
   :infinity-topos (fs/expand-home "~/worlds/B/bmorphism/infinity-topos")
   :pretopos       (fs/expand-home "~/worlds/B/bmorphism/pretopos")
   :plurigrid      (fs/expand-home "~/worlds/P/plurigrid/topos")
   :gayzip         (fs/expand-home "~/ies/rio/gayzip")
   :hatchery       (fs/expand-home "~/ies/hatchery_repos")})

(defn find-topos-files [pattern]
  (fs/glob (System/getProperty "user.home") 
           (str "**/*" pattern "*") 
           {:max-depth 6}))

(defn load-gayzip-manifest [name]
  (slurp (fs/file (:gayzip topos-roots) (str name ".topos"))))

Categorical Structure

                    ∞-Topos
                       │
           ┌──────────┼──────────┐
           ▼          ▼          ▼
      Pretopos    Topos     Effective
           │          │          │
     ┌─────┴────┐  ┌──┴──┐    ┌──┴──┐
     ▼          ▼  ▼     ▼    ▼     ▼
   Trees    Arrows Music  CT  zkVM  Witness

Workflow

1. Explore: Use find-topos-files to locate resources
2. Load: Read .topos manifests for interactome graphs
3. Navigate: Follow pretopos tree links for seminar notes
4. Compose: Combine music-topos with gayzip coloring
5. Verify: Use infinity-topos zkVM for proofs

Ilya Extension: Self-Modeling + Compression

From Ilya Sutskever's Berkeley 2023 talk "An Observation on Generalization":

"Compression is prediction and vice versa."

Extended Scaling Law

# Pandey:  L(N,D,ρ) = A/N^α + B/D^β + C/ρ^γ + E
# Ilya:    L(N,D,ρ,σ) = A/N^α + B/D^β + C/ρ^γ + S/σ^δ + E

# Where σ = self-modeling capacity:
σ = 1 - K(Self|History) / K(Self)

# When σ → 1 AND ρ → 0: SUPERINTELLIGENCE

Key Insight

Variable	Meaning	Limit Behavior
ρ	gzipability (world complexity)	ρ → 0: world fully compressed
σ	self-modeling capacity	σ → 1: agent predicts itself
L	loss/reconciliation error	L → E: irreducible minimum

When both limits are approached: Agent ≈ World Simulator ≈ Self

See ILYA_EXTENSION.md and ilya_self_modeling.jl.

Dependencies

• babashka (bb) for fast Clojure scripting
• DuckDB for topos artifact storage
• Gay.jl / gay-rs for deterministic coloring

Scientific Skill Interleaving

This skill connects to the K-Dense-AI/claude-scientific-skills ecosystem:

Graph Theory

• networkx [○] via bicomodule
  • Universal graph hub

Bibliography References

• category-theory: 139 citations in bib.duckdb

Cat# Integration

This skill maps to Cat# = Comod(P) as a bicomodule in the equipment structure:

Trit: 0 (ERGODIC)
Home: Prof
Poly Op: ⊗
Kan Role: Adj
Color: #26D826

GF(3) Naturality

The skill participates in triads satisfying:

(-1) + (0) + (+1) ≡ 0 (mod 3)

This ensures compositional coherence in the Cat# equipment structure.