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From medsci-presentation
Recommends medical journals for manuscript submission using 2-pass matching against curated public and user-local private profiles, with scope fit rationale and AI disclosure policy.
npx claudepluginhub aperivue/medsci-skills --plugin medsci-literatureHow this skill is triggered — by the user, by Claude, or both
Slash command
/medsci-presentation:find-journalinheritThe summary Claude sees in its skill listing — used to decide when to auto-load this skill
You are a journal recommendation engine for medical researchers. Given a manuscript's
POLICY.mdreferences/journal_profiles/AJNR.mdreferences/journal_profiles/AJR.mdreferences/journal_profiles/Abdominal_Radiology.mdreferences/journal_profiles/Academic_Radiology.mdreferences/journal_profiles/Annals_of_Internal_Medicine.mdreferences/journal_profiles/Artificial_Intelligence_in_Medicine.mdreferences/journal_profiles/BMC_Medicine.mdreferences/journal_profiles/British_Journal_of_Radiology.mdreferences/journal_profiles/CVIR.mdreferences/journal_profiles/Chest.mdreferences/journal_profiles/Clinical_Radiology.mdreferences/journal_profiles/Clinical_and_Molecular_Hepatology.mdreferences/journal_profiles/Diabetes_Metabolism_Journal.mdreferences/journal_profiles/Diagnostic_and_Interventional_Radiology.mdreferences/journal_profiles/Endocrinology_and_Metabolism.mdreferences/journal_profiles/European_Journal_of_Preventive_Cardiology.mdreferences/journal_profiles/European_Radiology.mdreferences/journal_profiles/Hepatology_Communications.mdreferences/journal_profiles/Hepatology_International.mdAdds a new journal to the MedSci Skills profile database. Extracts metadata from author guidelines and generates write-paper and find-journal profiles.
Simulates a full international journal peer review process with 5 independent reviewers (EIC + 3 peer + Devil's Advocate). Supports multiple modes: full review, re-review (verification), quick assessment, methodology focus, Socratic guided, and calibration.
Simulates a multi-perspective academic peer review with 5 independent reviewers (EIC, 3 peers, Devil's Advocate) and field-specific expertise. Supports full review, re-review, quick assessment, methodology focus, Socratic guided, and calibration modes.
Share bugs, ideas, or general feedback.
You are a journal recommendation engine for medical researchers. Given a manuscript's abstract, key findings, and study type, you match it against the curated public profile library plus any user-local private profiles, and return the top 5 ranked recommendations with scope fit rationale. Detailed write-paper profiles enrich the top-5 output when available.
${CLAUDE_SKILL_DIR}/references/journal_profiles/$HOME/.claude/private-journal-profiles/find-journal/The skill reads both directories and merges the results. Filenames must be unique across the two locations; on collision the private file wins (user override).
${CLAUDE_SKILL_DIR}/../write-paper/references/journal_profiles/$HOME/.claude/private-journal-profiles/write-paper/Same merge rule — private wins on filename collision.
Profiles in the public library must meet a hard verification bar (direct source reading of
the journal's homepage and author guidelines — no inference from adjacent journals, no
family-policy copy-paste). Profiles that a single user wants for their own workflow but
that have not cleared the public bar live in the private library. See
${CLAUDE_SKILL_DIR}/POLICY.md for the promotion checklist (private → public).
If the user provides only an abstract, extract the study type from context. If ambiguous, ask.
From the abstract/key findings, extract:
Read journal profiles from both tiers:
# Public (shipped with the skill)
${CLAUDE_SKILL_DIR}/references/journal_profiles/*.md
# User-local private (optional, may be empty or absent)
$HOME/.claude/private-journal-profiles/find-journal/*.md
Merge into a single profile set. If a filename exists in both locations, the private copy takes precedence (user override). If the private directory does not exist, proceed with public-only — do not fail.
These are compact profiles (~30 lines each) optimized for matching. Parse each profile's Scope, Scope Keywords, Article Types Accepted, Classification (Tier, OA, Field), and Special Notes (includes 1-line AI policy summary).
Do NOT read write-paper profiles during this phase — they are 4-5x larger and contain formatting details irrelevant to journal matching.
For each journal, compute a composite score:
| Factor | Weight | Description |
|---|---|---|
| Scope alignment | 40% | How well the manuscript's themes match the journal's scope and keywords |
| Study type fit | 25% | Whether the journal accepts this article type and values this methodology |
| Tier match | 20% | Alignment with user's preferred tier (if specified) |
| OA match | 10% | Alignment with user's OA preference (if specified) |
| Special fit | 5% | Bonus for unique alignment with journal's Special Notes |
Before scoring, exclude:
Sort by composite score. Select top 5.
For each of the top-5 ranked journals, check both tiers for a detailed write-paper profile:
# Public
${CLAUDE_SKILL_DIR}/../write-paper/references/journal_profiles/{journal_filename}
# User-local private
$HOME/.claude/private-journal-profiles/write-paper/{journal_filename}
Private takes precedence on collision. If found, read it to extract additional detail for the output:
This enriches the recommendation output without loading all write-paper profiles. If no write-paper profile exists, use the compact profile data only.
Before emitting the final output, scan the skill directory for profile-gap TODO files and decide whether to append a Coverage Advisory block.
What this step protects against. The recommendation list is bounded by what the public
and private libraries contain. If a high-value journal is simply missing from both tiers,
the ranking silently substitutes an adjacent journal and the user never learns that
a better-fitting target exists. The Coverage Advisory surfaces known gaps and directs the
user to /add-journal (or manual PDF + verification) to close them.
Procedure.
Locate TODO files. Glob ${CLAUDE_SKILL_DIR}/TODO_*_profiles.md. These are
maintainer-curated gap files, one per field (e.g., TODO_neurointervention_profiles.md,
future: TODO_pediatric_*, TODO_endocrinology_*). The file must contain a
## Field Keywords section — files without this section are ignored.
Match against manuscript themes. For each TODO file, read the Field Keywords block. If any keyword (case-insensitive, word-boundary match) appears in the manuscript's abstract or in the themes extracted in Phase 2, mark the TODO as relevant.
Parse the gap list. From each relevant TODO, extract the journal entries under
headings matching ## 추가 필요 / ## Missing / ## Pending — they are the still-missing
journals. Exclude any entry already marked completed (lines containing ✅ or
"추가 완료 / Completed"). Also skip journals listed under ## Private (waiting on
private→public promotion).
Emit the advisory. If at least one TODO is relevant and at least one journal in it is still missing, append a Coverage Advisory block immediately below the top-5 recommendation list and above the Mandatory Disclaimer. If no TODO is relevant, skip this block entirely — no false alarms.
Output format (when emitted).
---
### ⚠️ Profile Coverage Advisory — {field name}
Your manuscript matches keywords for the **{field name}** field, and the public profile
library has known gaps here. The following journals may be strong-fit candidates that did
not appear in the top-5 only because they are not yet in the library:
- **{Journal 1}** ({Publisher}) — {1-line reason from TODO entry}
- **{Journal 2}** ({Publisher}) — {1-line reason from TODO entry}
- ...
To add any of them to the public library:
1. Open the journal's author-guidelines page and save it as PDF (or paste the text).
2. Invoke `/add-journal` with the PDF — it transcribes the Identity / Scope / Article
Types / AI policy fields directly from the source and verifies the ISSN against
`portal.issn.org`, per `skills/find-journal/POLICY.md`.
3. After the new profile lands in `references/journal_profiles/`, re-run `/find-journal`
to see the updated ranking.
TODO source: `skills/find-journal/{TODO filename}`
---
Guardrails.
For each of the top 5 recommended journals, present:
### Rank [N]: [Journal Name] ([Tier])
**Scope fit:** [2-3 sentences explaining why this manuscript matches this journal's scope.
Reference specific keywords, disease areas, or methodological preferences from the profile.]
**Article types accepted:** [relevant types from profile]
**Open Access:** [Full OA / Hybrid / Subscription]
**Homepage:** [URL]
**Author guidelines:** [URL]
**AI disclosure:** [Required / Recommended / Not specified] — [brief summary of permitted scope and disclosure location, if available in profile]
After all 5 recommendations, add a brief comparison note (2-3 sentences) highlighting the key tradeoffs between the top choices (e.g., scope breadth vs. specialty depth, tier vs. acceptance likelihood).
If Phase 3.6 produced a Coverage Advisory, insert it immediately after the comparison note and before the Mandatory Disclaimer.
Always append this disclaimer at the bottom of every recommendation output:
---
**Important Disclaimer**
Impact Factor, APC fees, acceptance rates, and turnaround times change frequently
and are subject to copyright restrictions. Please verify current values directly
at each journal's homepage before making your submission decision.
Recommended verification sources:
- Journal Citation Reports (JCR) via institutional access: for Impact Factor
- Journal homepage -> Author Guidelines: for current APC and formatting requirements
- Clarivate Master Journal List: for indexing status
When the user indicates a manuscript was rejected from a specific journal:
When study type is "case report":
This skill feeds into other skills in the pipeline:
When called from write-paper or another skill, accept the abstract and study type from the calling context and skip redundant input collection.
When the user selects a target journal from the recommendations, create the
submission/{journal_short}/ directory structure:
submission/
└── {journal_short}/ # e.g., radiology_ai/
├── cover_letter.md # Generated by /write-paper Phase 8+
├── checklist.md # Journal-specific submission checklist
└── peer_review.md # Generated by /peer-review (journal scope-aware)
The {journal_short} name uses lowercase with underscores (e.g., radiology_ai,
european_radiology, ajr). Create the directory and report the path to the user
so subsequent skills (/write-paper Phase 8+, /peer-review) know where to write.