From pymol-skills
Control PyMOL molecular visualization software through natural language. This skill should be used when the user wants to visualize protein structures, create molecular representations, perform structural analysis, or generate publication-quality molecular images using PyMOL.
npx claudepluginhub aeghnnsw/cc-toolkit --plugin pymol-skillsThis skill uses the workspace's default tool permissions.
Control PyMOL molecular visualization software directly from Claude using the Model Context Protocol (MCP). Execute PyMOL commands, create visualizations, and perform structural analysis through natural language.
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Monitors deployed URLs for regressions in HTTP status, console errors, performance metrics, content, network, and APIs after deploys, merges, or upgrades.
Provides React and Next.js patterns for component composition, compound components, state management, data fetching, performance optimization, forms, routing, and accessible UIs.
Control PyMOL molecular visualization software directly from Claude using the Model Context Protocol (MCP). Execute PyMOL commands, create visualizations, and perform structural analysis through natural language.
Use this skill when the user wants to:
Before using PyMOL commands, ensure:
Run /pymol-skills:setup for installation instructions.
Execute direct PyMOL commands using native syntax.
Examples:
fetch 1ubq # Load structure from PDB
show cartoon, all # Display as cartoon
color red, chain A # Color chain A red
bg_color white # Set white background
zoom all # Zoom to fit all
Execute PyMOL Python API commands for complex operations.
Examples:
cmd.fetch('1ubq')
cmd.show('cartoon', 'all')
cmd.color('red', 'chain A')
cmd.align('mobile', 'target')
cmd.select('active_site', 'resi 50-100')
fetch 1ubqshow cartooncolor auto, allbg_color whitefetch 1ubq and fetch 1ubialign 1ubi, 1ubqcolor green, 1ubq and color cyan, 1ubiselect active, resi 45-50show sticks, activecolor yellow, active