By robinebers
Internal life-science research workflows that help Codex interpret a user's research question, normalize the relevant entities, choose the right skills, and synthesize evidence-backed answers across public resources. The plugin spans human genetics, functional genomics, expression, pathways, protein structure, chemistry, pharmacology, literature, clinical evidence, and public study discovery, with a research-router entrypoint for broad tasks and optional subagent-assisted parallel work when evidence lanes are independent.
Submit compact AlphaFold Protein Structure Database API requests for prediction, UniProt summary, sequence summary, and annotation lookups. Use when a user wants AlphaFold metadata or concise structure summaries
Submit compact Bgee SPARQL requests for healthy wild-type expression metadata and ontology-aware lookup patterns. Use when a user wants concise Bgee summaries; save raw results only on request.
Submit compact BindingDB REST API requests for ligand-target binding lookups by PDB, UniProt, or similarity search. Use when a user wants concise BindingDB summaries; save raw payloads only on request.
Fetch compact BioBank Japan PheWAS summaries for single variants by accepting rsID, GRCh38, or GRCh37 input and resolving to the required GRCh37 query. Use when a user wants concise BBJ association results for one variant
Submit compact bioRxiv and medRxiv API requests for details, publication-linkage, and DOI lookups. Use when a user wants concise preprint metadata summaries
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