By josephzsun
Bioinformatics-native AI agent skill library — pharmacogenomics, ancestry, scRNA-seq, metagenomics, variant annotation, genome comparison, and more. 24 skills with deterministic Python execution, reproducibility bundles, and local-first privacy.
Run a ClawBio bioinformatics analysis on user-provided genetic data
List all available ClawBio bioinformatics skills with their status and capabilities
Build a new ClawBio skill from the official template with full conformance enforcement.
Run a ClawBio skill demo with built-in sample data
Run read-only SQL against BigQuery public datasets with local result capture, cost safeguards, and reproducibility outputs.
Meta-agent that routes bioinformatics requests to specialised sub-skills. Handles file type detection, analysis planning, report generation, and reproducibility export.
Bioconductor package discovery, workflow recommendation, setup inspection, and starter code generation grounded in official Bioconductor containers and BiocManager.
Cell segmentation in fluorescence microscopy images. Supports Cellpose/cpsam (Cellpose 4.0) with additional backends planned. Produces segmentation masks, per-cell morphology metrics (area, diameter, centroid, eccentricity), overlay figures, and a report.md.
Place your study cohort in global genetic context by computing a joint PCA against the Simons Genome Diversity Project (SGDP) — 345 samples from 164 populations spanning every inhabited continent.
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The first bioinformatics-native AI agent skill library.
Built on OpenClaw (180k+ GitHub stars). Local-first. Privacy-focused. Reproducible.
AI Agents for Health: ClawBio Hackathon
Thu 23 April 2026, 12:00-19:00 · University of Westminster, Cavendish Campus, London
Register free on Luma
git clone https://github.com/ClawBio/ClawBio.git
cd ClawBio
pip install -r requirements.txt # Python 3.10+
python clawbio.py run pharmgx --demo
Or use as a Python library:
from clawbio import run_skill, list_skills
result = run_skill("pharmgx", demo=True)
Or install as a Claude Code plugin: /plugin marketplace add ClawBio/ClawBio
No
pip install clawbiopackage yet (planned for a future release).
46 executable skills + 8,000 Galaxy tools + 1,162 tests + benchmark validation. Local-first. No cloud. No guessing.
v0.5.0 released (4 Apr 2026): Validation and Benchmark Infrastructure. AD ground truth benchmark, mock API server for offline testing, swappable fine-mapping pipeline (SuSiE vs ABF), 74 benchmark tests, red/green TDD mandate. Release notes. DOI: 10.5281/zenodo.19420648.
Snap a photo of a medication in Telegram. ClawBio identifies the drug from the packaging, queries your pharmacogenomic profile from your own genome, and returns a personalised dosage card — on your machine, in seconds:
Warfarin | CYP2C9 *1/*2 Intermediate · VKORC1 High Sensitivity AVOID — DO NOT USE · Standard dose causes over-anticoagulation in this genotype.
Or take any genetic variant (identified by its rsID — a unique label like rs9923231) and search nine genomic databases at once to find every known disease association, tissue-specific effect, and population frequency. Or estimate your genetic predisposition to conditions like type 2 diabetes by combining thousands of small-effect variants into a single polygenic risk score. Or explore the UK Biobank — a half-million-person research dataset — by asking in plain English what fields measure blood pressure, grip strength, or depression, and get back the exact field IDs, descriptions, and linked publications you need.
Every result ships with a reproducibility bundle: commands.sh, environment.yml, and SHA-256 checksums. A reviewer can reproduce your Figure 3 in 30 seconds without emailing you.
npx claudepluginhub josephzsun/clawbioBattle-tested Claude Code plugin for engineering teams — 38 agents, 156 skills, 72 legacy command shims, production-ready hooks, and selective install workflows evolved through continuous real-world use
Comprehensive skill pack with 66 specialized skills for full-stack developers: 12 language experts (Python, TypeScript, Go, Rust, C++, Swift, Kotlin, C#, PHP, Java, SQL, JavaScript), 10 backend frameworks, 6 frontend/mobile, plus infrastructure, DevOps, security, and testing. Features progressive disclosure architecture for 50% faster loading.
Upstash Context7 MCP server for up-to-date documentation lookup. Pull version-specific documentation and code examples directly from source repositories into your LLM context.
Consult multiple AI coding agents (Gemini, OpenAI, Grok, Perplexity, plus codex, antigravity, and grok CLIs when installed) to get diverse perspectives on coding problems
Comprehensive startup business analysis with market sizing (TAM/SAM/SOM), financial modeling, team planning, and strategic research
v9.52.0 - Reliability wave: tangle contextual review correction loop with hard round ceiling, progress-supervised review rounds (per-agent stall watch, descendant-tree kills), council diversity and agy pin fixes, marketplace generator source-of-truth fix, provider troubleshooting runbook and cost-expectations docs. Run /octo:setup.
Complete creative writing suite with 10 specialized agents covering the full writing process: research gathering, character development, story architecture, world-building, dialogue coaching, editing/review, outlining, content strategy, believability auditing, and prose style/voice analysis. Includes genre-specific guides, templates, and quality checklists.