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Configure Hypo-Workflow global defaults in ~/.hypo-workflow/config.yaml

Internal legacy dashboard launcher removed from the active command surface.

Initialize or rescan a Hypo-Workflow project when the user wants architecture-aware setup before planning or execution.

Inspect and maintain Hypo-Workflow Knowledge Ledger records, indexes, compact summaries, and secret references under `.pipeline/knowledge/`.

Accept pending Hypo-Workflow Cycle work and complete the manual acceptance gate.

Run a preventive code audit when the user wants graded findings across security, bugs, architecture, performance, tests, and quality.

Enter lightweight append conversation mode when the user wants to continue discussing or make small follow-up changes without opening a new Milestone or Patch immediately.

Run a health check over config, state, prompts, and architecture when the user wants to diagnose a Hypo-Workflow workspace quickly.

Generate compact context views for large Hypo-Workflow runtime files without mutating the originals.

Manage Hypo-Workflow Cycles with independent milestone sequences, state, progress, reports, archives, and summaries.

Investigate a concrete failure when the user wants symptom-driven root-cause analysis instead of a preventive audit scan.

Generate, check, repair, and synchronize Hypo-Workflow documentation without hiding documentation governance inside sync or release.

Start and manage isolated Hypo-Workflow exploration worktrees without dirtying the main project worktree.

Interactive onboarding guide that senses the current project state and recommends a short Hypo-Workflow command path.

Show the full Hypo-Workflow command map when the user needs a quick reference or per-command usage details.

Read the unified lifecycle log when the user wants milestone, fix, audit, debug, review, or release history.

Manage the persistent lightweight Patch track for small fixes that should not open a full milestone.

Confirm the generated Hypo-Workflow plan when the user wants a final milestone summary before execution starts.

Split discovered work into milestones when the user wants Hypo-Workflow to produce a serial, reviewable delivery plan.

Run the discovery phase of Hypo-Workflow planning when the user needs requirement clarification, constraint gathering, and repo context analysis.

Append new milestones to an active Cycle without closing or reopening the Cycle.

Generate Hypo-Workflow artifacts from the approved milestone plan when the user wants prompts, config, and architecture outputs.

Review architecture changes after a completed milestone when the user wants downstream prompt impact analyzed.

Enter Hypo-Workflow planning mode when the user wants to design milestones before execution starts.

Reject pending Hypo-Workflow Cycle work with structured feedback and reopen the Cycle.

Run Hypo-Workflow release automation when the user wants regression, versioning, changelog, and publication handled in one flow.

Summarize the latest Hypo-Workflow report when the user asks for the most recent evaluation result or milestone outcome.

Reset Hypo-Workflow runtime artifacts when the user wants to clear state safely without deleting core project instructions by mistake.

Resume Hypo-Workflow execution from the saved state when the user wants to continue an interrupted or stopped pipeline.

Manage Hypo-Workflow rule severities, custom natural-language rules, lifecycle hooks, and shareable rule packs.

Configure Hypo-Workflow global defaults for agent platform, execution mode, subagents, plan mode, and dashboard.

Generate a complete project showcase package for introduction docs, technical docs, slides, and an optional poster.

Skip the current prompt or step when the user explicitly wants to bypass work while keeping the pipeline state recoverable.

Start Hypo-Workflow execution when the user wants to begin running milestones, continue automatically through the pipeline, or execute the first prompt.

Show current Hypo-Workflow progress when the user wants a concise status summary without mutating pipeline state.

Gracefully stop Hypo-Workflow when the user wants to pause execution without aborting the pipeline.

Synchronize Hypo-Workflow project adapters and lightweight derived context without executing pipeline milestones.

Internal cron-invoked Auto Resume watchdog for stalled executing pipelines.

5 hooks across 3 events

Hypo-Workflow progress status notifications