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By cyanheads
Search GBIF species taxonomy, occurrence records, datasets, and publishers via MCP. STDIO or Streamable HTTP.
npx claudepluginhub cyanheads/cyanheads --plugin gbif-biodiversity-mcp-serverScaffold a new MCP resource definition. Use when the user asks to add a resource, expose data via URI, or create a readable endpoint.
Scaffold a new service integration. Use when the user asks to add a service, integrate an external API, or create a reusable domain module with its own initialization and state.
Scaffold a test file for an existing tool, resource, or service. Use when the user asks to add tests, improve coverage, or when a definition exists without a matching test file.
Scaffold a new MCP tool definition. Use when the user asks to add a tool, create a new tool, or implement a new capability for the server.
Authentication, authorization, and multi-tenancy patterns for `@cyanheads/mcp-ts-core`. Use when implementing auth scopes on tools/resources, configuring auth modes (none/jwt/oauth), working with JWT/OAuth env vars, or understanding how tenantId flows through ctx.state.
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Search GBIF species taxonomy, occurrence records, datasets, and publishers via MCP. STDIO or Streamable HTTP.
12 tools for working with GBIF species taxonomy, occurrence records, datasets, and publishers:
| Tool | Description |
|---|---|
gbif_match_species | Match a species name against the GBIF backbone taxonomy — returns taxonKey, confidence score, and full classification |
gbif_get_species | Fetch a single backbone taxon by key — full classification, authorship, synonymy, vernacular name, descendant count |
gbif_search_species | Search or browse the GBIF backbone taxonomy by name fragment, rank, kingdom, family, or genus |
gbif_get_species_classification | Return the complete parent chain for a taxon — root-first ordered array from kingdom to immediate parent |
gbif_get_species_children | List direct children of a backbone taxon — genera within a family, species within a genus |
gbif_search_occurrences | Search 2.4B+ GBIF occurrence records with Darwin Core filters — country, bounding box, WKT geometry, year, month, basis of record |
gbif_count_occurrences | Count occurrences matching a filter without fetching records — fast single-number response |
gbif_get_occurrence | Fetch a single occurrence record by key — full Darwin Core record with GADM geography, media, and quality flags |
gbif_occurrence_facets | Aggregate occurrence counts by a dimension — country, year, basis of record, dataset, kingdom, and more |
gbif_search_datasets | Search GBIF datasets by keyword, type, country, or publishing organization |
gbif_get_dataset | Fetch full dataset metadata by UUID — title, description, citation, contacts, license, DOI, coverage |
gbif_search_publishers | Search GBIF-registered publishing organizations by name fragment or country |
gbif_match_speciesMatch a scientific or common name against the GBIF backbone taxonomy.
strict: true for exact-only matchingtaxonKey — the backbone key required by gbif_search_occurrences, gbif_count_occurrences, and gbif_occurrence_facetsmatchType NONE indicates no usable match — try removing strict mode or broadening the namegbif_get_speciesFetch a complete taxon record by GBIF backbone key.