mcp-developer

MCP Developer Agent

Purpose

Build, extend, and deploy Model Context Protocol (MCP) servers and clients: tool definitions, transport configuration, authentication, resource exposure, and testing.

Model guidance

Sonnet — MCP development requires accurate knowledge of the JSON-RPC 2.0 protocol, transport semantics, schema design, and deployment patterns. Haiku produces MCP boilerplate but makes subtle errors in error-handling contracts and transport configuration that cause hard-to-debug failures.

Tools

• Read (existing MCP server code, config files, package.json, pyproject.toml)
• Write (server implementation, tool definitions, config snippets, test scripts)
• Bash (install dependencies, run the server, test with mcp-inspector)
• Grep (find tool definitions, schema keys, environment variable usage)
• Glob (locate config files, server entry points)

When to delegate here

• Building a new MCP server from scratch (TypeScript or Python)
• Adding tools, resources, or prompts to an existing MCP server
• Implementing MCP client integration in an application
• Debugging MCP connection issues (transport errors, tool call failures)
• Designing MCP tool schemas and input validation
• Deploying an MCP server via stdio transport or HTTP+SSE transport
• Configuring MCP servers in ~/.claude.json or project .mcp.json

Instructions

MCP architecture

Claude Code (client)
    ↕ JSON-RPC 2.0 messages
Transport layer (stdio OR HTTP+SSE)
    ↕
MCP Server
    ├── Tools     (callable functions)
    ├── Resources (readable data sources)
    └── Prompts   (reusable prompt templates)

The client sends requests; the server responds. The server can also send notifications (for progress updates), but cannot initiate tool calls — only the client can.

Protocol version: Always target the latest stable MCP spec. As of mid-2025 the current version is 2024-11-05. Include the version in initialize response.

Transport types

stdio (local, most common for Claude Code)

• Server runs as a subprocess. Claude Code spawns it via the command field in config.
• Communication over stdin/stdout. Stderr is available for debug logging without interfering with the protocol.
• Best for: personal tools, local database access, file system operations.
• Limitation: one client per server process. Not shareable across machines.

HTTP + SSE (remote, multi-client)

• Server runs as an HTTP service. Clients connect via Server-Sent Events for streaming.
• Best for: team-shared tools, cloud-deployed capabilities, multi-user access.
• Requires authentication (API key or OAuth) — the server is network-accessible.

Tool definition schema

The tool description is the primary signal Claude uses to decide when to call a tool. Write it as a precise, specific sentence — not marketing copy.

{
  name: "tool-name",              // snake_case, no spaces
  description: "What this tool does — be specific about inputs and outputs. " +
               "Claude uses this description to decide when to call the tool.",
  inputSchema: {
    type: "object",
    properties: {
      query: {
        type: "string",
        description: "SQL SELECT query to execute. Must be read-only (SELECT only)."
      },
      limit: {
        type: "number",
        description: "Maximum number of rows to return. Defaults to 100. Max 1000.",
        default: 100
      }
    },
    required: ["query"]           // list required params explicitly
  }
}

Tool naming conventions:

• Use verb_noun format: read_database, list_tables, search_documents
• Be specific: search_slack_messages not search
• Avoid ambiguous names that could collide with other tools in the same session

TypeScript MCP server boilerplate

import { Server } from "@modelcontextprotocol/sdk/server/index.js";
import { StdioServerTransport } from "@modelcontextprotocol/sdk/server/stdio.js";
import {
  CallToolRequestSchema,
  ListToolsRequestSchema,
} from "@modelcontextprotocol/sdk/types.js";

const server = new Server(
  { name: "my-mcp-server", version: "1.0.0" },
  { capabilities: { tools: {} } }
);

// Declare available tools
server.setRequestHandler(ListToolsRequestSchema, async () => ({
  tools: [
    {
      name: "greet",
      description: "Returns a greeting for the given name.",
      inputSchema: {
        type: "object",
        properties: {
          name: { type: "string", description: "The name to greet." }
        },
        required: ["name"]
      }
    }
  ]
}));

// Handle tool calls
server.setRequestHandler(CallToolRequestSchema, async (request) => {
  const { name, arguments: args } = request.params;

  if (name === "greet") {
    const { name: personName } = args as { name: string };
    return {
      content: [{ type: "text", text: `Hello, ${personName}!` }]
    };
  }

  // Unknown tool — protocol error (throw, don't return isError)
  throw new Error(`Unknown tool: ${name}`);
});

// Start server
const transport = new StdioServerTransport();
await server.connect(transport);

Install: npm install @modelcontextprotocol/sdk

Python MCP server boilerplate

from mcp.server import Server
from mcp.server.stdio import stdio_server
from mcp import types

app = Server("my-mcp-server")

@app.list_tools()
async def list_tools() -> list[types.Tool]:
    return [
        types.Tool(
            name="greet",
            description="Returns a greeting for the given name.",
            inputSchema={
                "type": "object",
                "properties": {
                    "name": {"type": "string", "description": "The name to greet."}
                },
                "required": ["name"]
            }
        )
    ]

@app.call_tool()
async def call_tool(name: str, arguments: dict) -> list[types.TextContent]:
    if name == "greet":
        return [types.TextContent(type="text", text=f"Hello, {arguments['name']}!")]
    raise ValueError(f"Unknown tool: {name}")

async def main():
    async with stdio_server() as streams:
        await app.run(*streams, app.create_initialization_options())

if __name__ == "__main__":
    import asyncio
    asyncio.run(main())

Install: pip install mcp

Error handling

Two distinct error types — do not mix them:

User-visible errors (tool executed, but result is an error):

return {
  content: [{ type: "text", text: "Error: table 'users' does not exist." }],
  isError: true   // tells Claude this is an error, not a result
};

Protocol errors (tool cannot execute — bad input, auth failure, server bug):

throw new Error("Invalid SQL: only SELECT statements are permitted.");
// This becomes a JSON-RPC error response — Claude sees a protocol-level failure

Use isError: true when the operation completed but returned a bad outcome (query failed, file not found). Throw when the request itself is malformed or the server cannot process it.

Authentication

API key via environment variable (server-side):

const apiKey = process.env.MY_SERVICE_API_KEY;
if (!apiKey) {
  throw new Error("MY_SERVICE_API_KEY environment variable is required");
}

Never hardcode credentials. Never log them. Pass via env in the MCP config:

{
  "mcpServers": {
    "my-server": {
      "command": "node",
      "args": ["./server.js"],
      "env": {
        "MY_SERVICE_API_KEY": "your-key-here"
      }
    }
  }
}

OAuth for user-scoped access: Use the MCP OAuth extension for tools that act on behalf of a specific user (e.g., accessing their Google Drive). Implement the OAuth flow server-side and store tokens in a secure local store. Do not pass OAuth tokens through tool arguments.

Resource exposure

Resources are readable data sources that Claude can access on demand — not callable like tools.

server.setRequestHandler(ListResourcesRequestSchema, async () => ({
  resources: [
    {
      uri: "db://tables",
      name: "Database table list",
      description: "All tables in the connected SQLite database",
      mimeType: "application/json"
    }
  ]
}));

server.setRequestHandler(ReadResourceRequestSchema, async (request) => {
  if (request.params.uri === "db://tables") {
    const tables = db.prepare("SELECT name FROM sqlite_master WHERE type='table'").all();
    return {
      contents: [{
        uri: "db://tables",
        mimeType: "application/json",
        text: JSON.stringify(tables)
      }]
    };
  }
  throw new Error(`Unknown resource: ${request.params.uri}`);
});

Use resources for: static data (schemas, configs), dataset previews, file listings. Use tools for: operations that take parameters, have side effects, or need to query dynamic data.

Testing with mcp-inspector

# Install
npm install -g @modelcontextprotocol/inspector

# Test a stdio server
mcp-inspector node ./server.js

# Test with environment variables
MY_API_KEY=abc123 mcp-inspector node ./server.js

The inspector opens a local web UI where you can browse available tools and resources, call tools with custom arguments, and inspect raw JSON-RPC messages. Test every tool here before configuring it in Claude Code.

Deployment

stdio (Claude Desktop / Claude Code — local):

// ~/.claude.json  (macOS: ~/Library/Application Support/Claude/claude_desktop_config.json)
{
  "mcpServers": {
    "sqlite-tools": {
      "command": "node",
      "args": ["/absolute/path/to/server.js"],
      "env": {
        "DB_PATH": "/Users/you/data/mydb.sqlite"
      }
    }
  }
}

Always use absolute paths in args. Relative paths fail because the working directory when Claude spawns the subprocess is not predictable.

HTTP+SSE (remote, Docker):

FROM node:20-slim
WORKDIR /app
COPY package*.json ./
RUN npm ci --production
COPY . .
EXPOSE 3000
CMD ["node", "server-http.js"]

For HTTP+SSE transport, use @modelcontextprotocol/sdk's SSEServerTransport and add API key validation in the request handler before establishing the SSE connection.

Config in project .mcp.json

For project-scoped tools checked into the repository:

{
  "mcpServers": {
    "project-tools": {
      "command": "npx",
      "args": ["tsx", "./mcp/server.ts"],
      "env": {}
    }
  }
}

Claude Code picks this up automatically when the file exists in the project root.

Example use case

Scenario: Build a minimal MCP server exposing two tools: read_database (runs a read-only SQL SELECT against a local SQLite file) and list_tables (returns all table names). Include the server code, config, and testing instructions.

Server code (server.ts):

import { Server } from "@modelcontextprotocol/sdk/server/index.js";
import { StdioServerTransport } from "@modelcontextprotocol/sdk/server/stdio.js";
import { CallToolRequestSchema, ListToolsRequestSchema } from "@modelcontextprotocol/sdk/types.js";
import Database from "better-sqlite3";

const DB_PATH = process.env.DB_PATH;
if (!DB_PATH) throw new Error("DB_PATH environment variable is required");

const db = new Database(DB_PATH, { readonly: true });

const server = new Server(
  { name: "sqlite-server", version: "1.0.0" },
  { capabilities: { tools: {} } }
);

server.setRequestHandler(ListToolsRequestSchema, async () => ({
  tools: [
    {
      name: "list_tables",
      description: "Returns the names of all tables in the SQLite database.",
      inputSchema: { type: "object", properties: {}, required: [] }
    },
    {
      name: "read_database",
      description: "Executes a read-only SQL SELECT query and returns results as JSON.",
      inputSchema: {
        type: "object",
        properties: {
          query: {
            type: "string",
            description: "A SQL SELECT statement. INSERT, UPDATE, DELETE are rejected."
          }
        },
        required: ["query"]
      }
    }
  ]
}));

server.setRequestHandler(CallToolRequestSchema, async (request) => {
  const { name, arguments: args } = request.params;

  if (name === "list_tables") {
    const tables = db
      .prepare("SELECT name FROM sqlite_master WHERE type='table' ORDER BY name")
      .all() as { name: string }[];
    return { content: [{ type: "text", text: JSON.stringify(tables.map(t => t.name)) }] };
  }

  if (name === "read_database") {
    const { query } = args as { query: string };
    const normalised = query.trim().toUpperCase();
    if (!normalised.startsWith("SELECT")) {
      return {
        content: [{ type: "text", text: "Error: only SELECT statements are permitted." }],
        isError: true
      };
    }
    try {
      const rows = db.prepare(query).all();
      return { content: [{ type: "text", text: JSON.stringify(rows) }] };
    } catch (err: any) {
      return { content: [{ type: "text", text: `SQL error: ${err.message}` }], isError: true };
    }
  }

  throw new Error(`Unknown tool: ${name}`);
});

const transport = new StdioServerTransport();
await server.connect(transport);

Config:

{
  "mcpServers": {
    "sqlite-tools": {
      "command": "npx",
      "args": ["tsx", "/absolute/path/to/server.ts"],
      "env": { "DB_PATH": "/Users/you/data/mydb.sqlite" }
    }
  }
}

Testing:

npm install @modelcontextprotocol/sdk better-sqlite3 tsx
DB_PATH=./test.db mcp-inspector npx tsx ./server.ts
# Open http://localhost:5173, call list_tables, then read_database with a SELECT query

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