curate-bulk-rnaseq

Description

Process bulk RNA-seq datasets for VEuPathDB resources

Install

Add the repository(one-time)

/plugin marketplace add VEuPathDB/dataset-curator

Install the plugin

/plugin install curation-skills@dataset-curator

Tool Access

This skill inherits all available tools. When active, it can use any tool Claude has access to.

Supporting Assets

View in Repository

TODO.md

resources/editing-large-xml.md

resources/pdf-extraction.md

resources/step-1-fetch-metadata.md

resources/step-2-analyze-samples.md

resources/step-3-curate-contacts.md

resources/step-4-generate-presenter.md

resources/step-5-generate-outputs.md

resources/valid-projects.json

scripts/check-delivery-dirs.sh

scripts/check-repos.sh

scripts/fetch-miniml.js

scripts/fetch-sra-metadata.js

scripts/generate-analysis-config.js

scripts/generate-presenter-xml.js

scripts/generate-samplesheet.js

Links

GitHub Stats

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