/shipyard:init - Project Initialization

You are executing the Shipyard initialization workflow. Follow these steps precisely and in order.

<prerequisites>

Step 1: Check Existing State

Check if a .shipyard/ directory already exists in the current project root.

• If it exists AND .shipyard/config.json exists: Read existing config.json values. These become the pre-filled defaults shown in Step 3 (in parentheses after each option). Proceed to Step 2 — the user may want to change any or all settings.

• If --fresh flag is provided: Require explicit confirmation from the user before proceeding. If confirmed, rename .shipyard/ to .shipyard-archive-{YYYY-MM-DD}/ and create a fresh .shipyard/ directory (no pre-filled defaults). If not confirmed, stop.

• If .shipyard/ does not exist: Create the .shipyard/ directory and proceed to Step 2.

Step 2: Lightweight Project Detection

Determine whether this is a brownfield (existing source code) or greenfield (empty/new project) by checking for source files and package manifests (e.g., package.json, go.mod, Cargo.toml, requirements.txt, *.py, *.ts, *.go, *.rs, etc.).

Also check if docs/codebase/ exists and contains .md files. If it does, this means a previous /shipyard:map was run and committed — store this as detected_codebase_path = "docs/codebase" for use in Step 4.

This is used to tailor next-steps guidance in Step 5 and to set a smart default for codebase_docs_path — no codebase mapping or analysis is performed.

</prerequisites> <execution>

Step 3: Collect Settings

Collect workflow preferences from the user using three AskUserQuestion calls. Each call stays within the 4-question limit. Wait for the user's answers before proceeding to the next batch.

Batch 1: Workflow Preferences

Use AskUserQuestion with these 3 questions:

1. Interaction style — "Do you prefer interactive mode or autonomous mode?"

   • Interactive (Recommended) — Approve each phase before execution. Safer for unfamiliar codebases.
   • Autonomous — Execute full roadmap with checkpoints. Faster for well-defined projects.

2. Git tracking — "How should Shipyard create commits?"

   • Per task (Recommended) — Atomic commit after each completed task. Easy to review and revert.
   • Per phase — Batch all task changes into one commit per phase. Cleaner history.
   • Manual — Shipyard won't commit. You control all git operations.

3. Review depth — "How thorough should review gates be?"

   • Detailed (Recommended) — Two-stage review (spec compliance + code quality) between build steps.
   • Lightweight — Quick verification only. Faster but catches fewer issues.

Batch 2: Quality Gates

Use AskUserQuestion with these 4 questions:

4. Security auditing — "Should Shipyard run a security audit after each phase build?"

   • Yes (Recommended) — OWASP checks, secrets detection, dependency vulnerabilities. Recommended for production projects.
   • No — Skip security auditing. You can still run /shipyard:audit manually.

5. Code simplification — "Should Shipyard check for duplication and complexity after each phase?"

   • Yes (Recommended) — Detects AI-generated bloat, dead code, and over-engineering. Recommended for AI-heavy workflows.
   • No — Skip simplification review. You can still run /shipyard:simplify manually.

6. IaC validation — "Should Shipyard validate infrastructure-as-code files (Terraform, Ansible, Docker)?"

   • Auto (Recommended) — Validate only when IaC files are detected in the changeset.
   • Always — Run IaC validation on every phase regardless.
   • Never — Skip IaC validation entirely.

7. Documentation generation — "Should Shipyard generate documentation after each phase build?"

   • Yes (Recommended) — Auto-generate and update docs after each phase. Keeps documentation current.
   • No — Skip documentation generation. You can still run /shipyard:document manually.

Batch 3: Storage, Model & Context Preferences

Use AskUserQuestion with these 3 questions:

8. Codebase docs location — "Where should Shipyard store codebase analysis docs?"

   • .shipyard/codebase (Recommended) — Keeps analysis in the local .shipyard/ directory (gitignored by default).
   • docs/codebase — Stores in the project's docs/ directory so analysis is committed and shared with the team. If a docs/codebase/ directory with .md files was detected in Step 2, note this to the user and default to docs/codebase.

9. Model routing — "Which model routing strategy should Shipyard use for its agents?"

   • Default routing (Recommended) — Haiku for validation, Sonnet for building/review/planning/auditing/simplification/documentation/mapping, Opus for architecture/debugging. Balances cost and quality.
   • All Sonnet — Use Sonnet for everything. Good balance of speed and capability.
   • All Opus — Use Opus for everything. Maximum quality, highest cost.

10. Context loading — "How much project context should Shipyard load at session start?"

• Auto (Recommended) — Adjusts based on current state (minimal when idle, full during execution).
• Minimal — Always load minimal context. Fastest startup, less awareness.
• Full — Always load everything including codebase docs. Slowest startup, maximum awareness.

Step 4: Write Configuration & State

After collecting all answers, write the following files:

config.json

Write .shipyard/config.json with the user's choices. Map answers to config keys:

• Batch 1: interaction_mode ("interactive" / "autonomous"), git_strategy ("per_task" / "per_phase" / "manual"), review_depth ("detailed" / "lightweight")
• Batch 2: security_audit (true / false), simplification_review (true / false), iac_validation ("auto" / true / false), documentation_generation (true / false), plan_critique (true / false)
• Batch 3: codebase_docs_path (".shipyard/codebase" / "docs/codebase"), model_routing (object — see Model Routing Protocol in docs/PROTOCOLS.md for the full key set and defaults per strategy), context_tier ("auto" / "minimal" / "full")

Also include: created_at (ISO timestamp), version ("1.3").

Use defaults from docs/PROTOCOLS.md for any unanswered or skipped fields: security_audit: true, simplification_review: true, iac_validation: "auto", documentation_generation: true, plan_critique: true, codebase_docs_path: ".shipyard/codebase", context_tier: "auto".

STATE.json & HISTORY.md

Follow State Update Protocol (update .shipyard/STATE.json and .shipyard/HISTORY.md via state-write.sh; see docs/PROTOCOLS.md) -- create initial state:

• Phase: 1
• Position: Initialization complete, ready for planning
• Status: ready
• Message: Project initialized

Commit

git add .shipyard/
git commit -m "shipyard: initialize project"

</execution> <output>

Step 5: Guided Next Steps

Display contextual guidance based on brownfield/greenfield detection from Step 2:

Brownfield (existing codebase):

Project initialized! Your next step:

Run /shipyard:map — This analyzes your codebase so Shipyard understands your project's stack, architecture, conventions, and concerns. It takes a few minutes and everything after this will be better for it.

After mapping, Shipyard will guide you to the next step.

Greenfield (new project):

Project initialized! Your next step:

Run /shipyard:brainstorm — This walks you through a requirements conversation to define what you're building, your goals, constraints, and success criteria. Shipyard will capture everything into a project definition.

After brainstorming, Shipyard will guide you to the next step.

</output>